
Genetic relatedness of infecting and reinfecting respiratory syncytial virus strains identified in a birth cohort from rural Kenya. Journal of Infectious Diseases. 2012 Nov 15;206(10):1532-41.
Agoti CN, Mwihuri AG, Sande CJ, Onyango CO, Medley GF, Cane PA, Nokes DJ.

The natural history of respiratory syncytial virus in a birth cohort: the influence of age and previous infection on reinfection and disease. American journal of epidemiology. 2012 Nov 1;176(9):794-802.
Ohuma EO, Okiro EA, Ochola R, Sande CJ, Cane PA, Medley GF, Bottomley C, Nokes DJ.

Treatment failure among Kenyan children with severe pneumonia–a cohort study. The Pediatric infectious disease journal. 2012 Sep;31(9):e152.
Webb C, Ngama M, Ngatia A, Shebbe M, Morpeth S, Mwarumba S, Bett A, Nokes DJ, Seale AC, Kazungu S, Munywoki P.

Molecular epidemiology of human rhinovirus infections in Kilifi, coastal Kenya. Journal of medical virology. 2012 May 1;84(5):823-31.
Onyango CO, Welch SR, Munywoki PK, Agoti CN, Bett A, Ngama M, Myers R, Cane PA, Nokes DJ.


A cost effectiveness and capacity analysis for the introduction of universal rotavirus vaccination in Kenya: comparison between Rotarix and RotaTeq vaccines. PloS one. 2012 Oct 24;7(10):e47511.
van Hoek AJ, Ngama M, Ismail A, Chuma J, Cheburet S, Mutonga D, Kamau T, Nokes DJ.

A frequentist approach to estimating the force of infection for a respiratory disease using repeated measurement data from a birth cohort. Statistical methods in medical research. 2011 Oct;20(5):551-70.
Mwambi H, Ramroop S, White LJ, Okiro EA, Nokes DJ, Shkedy Z, Molenberghs G.

Improved detection of respiratory viruses in pediatric outpatients with acute respiratory illness by real-time PCR using nasopharyngeal flocked swabs. Journal of clinical microbiology. 2011 Sep 1;49(9):3365-7.
Munywoki PK, Hamid F, Mutunga M, Welch S, Cane P, Nokes DJ.

Added value of an oropharyngeal swab in detection of viruses in children hospitalized with lower respiratory tract infection. Journal of clinical microbiology. 2011 Jun 1;49(6):2318-20.
Hammitt LL, Kazungu S, Welch S, Bett A, Onyango CO, Gunson RN, Scott JA, Nokes DJ.

Seroprevalence, predictors and estimated incidence of maternal and neonatal Herpes Simplex Virus type 2 infection in semi-urban women in Kilifi, Kenya. BMC infectious diseases. 2011 May 31;11(1):155.
Nyiro JU, Sanders EJ, Ngetsa C, Wale S, Awuondo K, Bukusi E, Price MA, Amornkul PN, Nokes DJ.

Sensitivity of hospital-based surveillance for severe disease: a geographic information system analysis of access to care in Kilifi district, Kenya. Bulletin of the World Health Organization. 2011 Feb;89(2):102-11.
Moïsi JC, Nokes DJ, Gatakaa H, Williams TN, Bauni E, Levine OS, Scott JA.

Intrapatient variation of the respiratory syncytial virus attachment protein gene. Journal of virology. 2010 Oct 1;84(19):10425-8.
Agoti CN, Mbisa JL, Bett A, Medley GF, Nokes DJ, Cane PA.

Rotavirus genetic diversity, disease association, and temporal change in hospitalized rural Kenyan children. Journal of Infectious Diseases. 2010 Sep 1;202(Supplement 1):S180-6.
Nokes DJ, Peenze I, Netshifhefhe L, Abwao J, De Beer MC, Seheri M, Williams TN, Page N, Steele D.

Global burden of acute lower respiratory infections due to respiratory syncytial virus in young children: a systematic review and meta-analysis. The Lancet. 2010 May 7;375(9725):1545-55.
Nair H, Nokes DJ, Gessner BD, Dherani M, Madhi SA, Singleton RJ, O'Brien KL, Roca A, Wright PF, Bruce N, Chandran A.

Duration of shedding of respiratory syncytial virus in a community study of Kenyan children. BMC infectious diseases. 2010 Jan 22;10(1):15.
Okiro EA, White LJ, Ngama M, Cane PA, Medley GF, Nokes DJ.

The level and duration of RSV-specific maternal IgG in infants in Kilifi Kenya. PloS one. 2009 Dec 2;4(12):e8088.
Ochola R, Sande C, Fegan G, Scott PD, Medley GF, Cane PA, Nokes DJ.

Incidence and severity of respiratory syncytial virus pneumonia in rural Kenyan children identified through hospital surveillance. Clinical infectious diseases. 2009 Nov 15;49(9):1341-9.
Nokes DJ, Ngama M, Bett A, Abwao J, Munywoki P, English M, Scott JA, Cane PA, Medley GF.

Emergency triage assessment for hypoxaemia in neonates and young children in a Kenyan hospital: an observational study. Bulletin of the World Health Organization. 2009 Apr;87(4):263-70.
Mwaniki MK, Nokes DJ, Ignas J, Munywoki P, Ngama M, Newton CR, Maitland K, Berkley JA.

Evaluation of a measles vaccine campaign by oral-fluid surveys in a rural Kenyan district: interpretation of antibody prevalence data using mixture models. Epidemiology and infection. 2009 Feb 1;137(02):227-33.
Ohuma EO, Okiro EA, Bett A, Abwao J, Were S, Samuel D, Vyse A, Gay N, Brown DW, Nokes DJ.